Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGELIDFKTPIRYIGSDFQENVWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
4ZYE Chain:A ((13-158)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PMLVYGLY-KSPLGYITVAKDDKGFIMLDFCD-------CVEGNSRDDSSFT--------EFFHKLDLYFEGKPINLREPINLKTYPFRLSVFKEVMKIPWGKVMTYKQIADSLG--TSPRAVGMALSKNPILLIIPCHRVIAENG-IGGYSRGVKLKRALLELE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80575 for 1090 contacts (-73.9/contact) +
2D Compatibility (PS) -15589 + (NN) -1948 + (LL) 11932
1D Compatibility (HY) -14400 + (ID) 2550
Total energy: -103130.0 ( -94.61 by residue)
QMean score : 0.562
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