Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVSYYETILKSLRWVRKTMYTSNNQIKEEKNVTAIAITSERGLCGAYNSEVFAEIDQLIESLGDQVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTT----AVTAD-FIDLIHSEQMDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSDTELIEVDYVLD-FETD-DEQVEQLLLENYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEE--AIFDARKQALQQKTGELLDIISGAQTIRKDEE |
| 3OFN Chain:G ((75-276)) | ---------------------------------------------------------------------------VAITSDKGLCGSIHSQLAKAVRR---HLNDQPNADIVTIGDKIKMQLLRTHPN---NIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIF-------NAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVI--TNELVDIITGASS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97566 for 1340 contacts (-72.8/contact) +
2D Compatibility (PS) -20593 + (NN) -5456 + (LL) 8232
1D Compatibility (HY) -10000 + (ID) 2600
Total energy: -127983.0 ( -95.51 by residue)
QMean score : 0.389
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