Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDEIIFWLTGYDQDSLQQAIDQAIDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLVDELAKGKKMEKILRK
3WKV Chain:A ((154-189))
----------------------------------------------------------------------ARIINGIIIS-RMKQLEDKIEELLSKIYHLENEIARL---------
General information:
TITO was launched using:
RESULT:
Template:
3WKV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3998 for 140 contacts (-28.6/contact) +
2D Compatibility (PS) -3885 + (NN) -1400 + (LL) 6596
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -6837.0 ( -48.84 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_3WKV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WKV-query.scw
PDB file :
Tito_Scwrl_3WKV.pdb
: