Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKS--DLLLIFQALSDPIRLDIFLCLLKSKEKRFSGTTYNI---SKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE
3CUO Chain:A ((1-89))
MTELAQLQASAEQAAALLKAMSHPKRL-LILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAI------------
General information:
TITO was launched using:
RESULT:
Template:
3CUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53441 for 519 contacts (-103.0/contact) +
2D Compatibility (PS) -8696 + (NN) -3045 + (LL) 492
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -70740.0 ( -136.30 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_3CUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CUO-query.scw
PDB file :
Tito_Scwrl_3CUO.pdb
: