Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDSEMNHDFDLEKQFAFFVVNFRMSKHDF--------EELTEVEKNFIMKEWENKVIFESTMLRNAVLNAEQNLNRKRNSRFIDLHKKRQKKADVNYTVNALQAISENEAKEGKAWIDRIYGANGLRRPKNKEERRNVNGGF |
4MQ3 Chain:A ((75-132)) | ------------------VLNYMGVKHKFGIPGNPQSQALVE-NVNHTLKVWIQKFLPETTSLDNALSLAVHSLNKK----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5718 for 231 contacts (24.8/contact) +
2D Compatibility (PS) -5230 + (NN) -201 + (LL) 5172
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: 2059.0 ( 8.91 by residue)
QMean score : 0.306
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