Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLFLELNGKVHSLSETFPGLSVQEVSRQSPQLSMETAEIAGTDGVIPGMTQFKPFIFSAKCNLQALDIPDYHLAVREIYEFLFQRDSYYIWSDQMPGIRYEVHPKPVDFSRESDRVGLLTIEFDVFKGYAESRGTSLDPMTFEVDLWQMGMNLSNRDDLFYIFKENTFRVYNAGSDRVNPLMRHELDIAMTANGTPTIHNLTTGESFEYQKELRKTDVLLLNNIYPLVNNRRVGKDTNHGIITLEKGWNDFEIKGVTDVTIAFNFPFIYR |
| 3BPD Chain:A ((18-69)) | ---------------------------EPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNL-DYEQIKGVI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BPD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9094 for 281 contacts (-32.4/contact) +
2D Compatibility (PS) -5389 + (NN) 269 + (LL) 13252
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -2962.0 ( -10.54 by residue)
QMean score : -0.009
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