Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYVIIQSMDKEVEEILTDIDYGSFSYDYEKNTSRAISFTVNKTKQNAAIFDLVGNEAILTY-----QGQQFVIKKCT-PKSIGGTLSKQITAQHICYTVQDHVQYNVKSGRKKYSIQTVLEFALQDNVLGFSYEIQGSFPLVELEDLGNKNGLELVNLCLEEFGAILFADNKKLYFYDEKSWYVKTEKQFRYLYNTEEVSVDTNTDNLKTEIKCYGKQKENADKLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILDVPETALTISYKGKEPVSERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRIQTQIANQVKKASVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD |
| 2KZ4 Chain:A ((55-108)) | --------------------------------AIGTVRIWIRYR-------KDINATSRIKVSTGPLAGRVLNIIGQPLPDAA--RTRLEILCRE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9361 for 255 contacts (-36.7/contact) +
2D Compatibility (PS) -5361 + (NN) -2156 + (LL) 21944
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 3666.0 ( 14.38 by residue)
QMean score : 0.450
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