Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLDLWKWEMLLQGREFRNKTNDNWQKLMDWSDFISTGLSAIYVYVNKADATLNNKIDTVDKAVNARVNELISGTEQLSEVVDARSDAFGARYPVLRERLNQEQLNFSKKSTIQFDASTIISMEKQDIGLLTSKKISEAQTVCFLNISSLDEEADIVLEKTGETSFSDNLTSLVFAKIGTNERYQMEPVGA |
| 3LI2 Chain:A ((254-289)) | -----------------------------------------------KLNAVKNNRVDIVDRDVWARSRGLISSEEMAKELVE------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8271 for 159 contacts (52.0/contact) +
2D Compatibility (PS) -3650 + (NN) 1811 + (LL) 11388
1D Compatibility (HY) -1600 + (ID) 800
Total energy: 15420.0 ( 96.98 by residue)
QMean score : 0.397
|
|
|