Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQKESTAGAEQKANTALNSA-KDYVDTIGEGTVIFKGANLMGAGQ-SFKWDASK-LKFGMTLLFSRYDAANNTPQDYYYHSVFLSKAQLVELAGKGILVQMPSTTYGDRKYLYVSTTGLSGHFDNSNYAAWALRQVTIM |
3D8M Chain:A ((17-82)) | -----------------------------TINDDLE--------AINSELTSGG-----NVVHKTG-DETIAGKKTFTGNVEVNGSLTLPVQTLTVEAGNGLQLQLTKK------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12173 for 203 contacts (60.0/contact) +
2D Compatibility (PS) -6194 + (NN) 3311 + (LL) 8300
1D Compatibility (HY) 2800 + (ID) 450
Total energy: 19940.0 ( 98.23 by residue)
QMean score : -0.041
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