Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLK-TATTILAPIDFF---DDIVLLNATREMQDFVAETAIKQIN--QLGGR----FSISINIPAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV
3N3T Chain:A ((29-266))
-----TRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLVMPSAFIPAAEDTGLIVA---LSDWVLEACCTQLRAWQQQGRAADDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVMLVMTDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFGQGNLMSTP-------------
General information:
TITO was launched using:
RESULT:
Template:
3N3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107359 for 1782 contacts (-60.2/contact) +
2D Compatibility (PS) -24810 + (NN) -9290 + (LL) 1900
1D Compatibility (HY) -16400 + (ID) 3700
Total energy: -159659.0 ( -89.60 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_3N3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N3T-query.scw
PDB file :
Tito_Scwrl_3N3T.pdb
: