Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLLVAVISVFALVLTACGGSGASSDKANGSGKAKDGGSLIIGVTGDPEVINPNYASDRVTLTIQQAVYAPLFWE-----------VDGKPALAKSLDISDDNLTYTVKLKDGLTWHDGKPLTADDVVFTVNSIL----DTKQNSPNRGNFVFD-DKPVKVEAVDDTTVKFTLPTVAPAFENTIKTFFP------IPKHIFEGVENIEKSDKNKNPIGSGPYKFVEYKTGEYVSLERFNDYFDGKPKLDKVTFRITKDQNAANLALQNGEIN-LKSIQPSDRNKVEKASAVNIITYPENRLSYATFNENQPALKSKELRQALSYALDREEIIDAAYGSDEYAKPASSFLTENTKYFTDKVETYDQDIAKAKKLVKESGFDTSQKLTVYYLNNSKSQESIALYLQ-QQYKEIGVTLDLKPTDPNALS--NITLDRKNADYSIALNGYIMGNDPDAYKSLYLSDAP-----YNYSNYHNKDLDALWEKGAVTADDKERQEIYEKIQNTIADDAVIYPISYDNAVLALDSRYGGQKAATPQPVTMFRDLSKLYLTE |
4ZED Chain:A ((6-456)) | ----------------------------------------ALRLGVNGLPNSLEPVNAISNVGPRIVNQIFDTLIARDFFAKGAPGNAIDLVPALAESWERIDEK-SVRFKLRQKVMFHDGVELTADDVAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPV-VE--DKYTV--TLRTKTPSY--LIETFVASWMSRIVPKEYYKKLGAVDFGNK---PVGTGPYKFVEFVAGDRVVLEANDAYWGPKPTASKITYQIVAEPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTLIENFHMFTFNMNQEVFKDKKLRRALALAVNRPIMVEALW-KKQASIPAGFNFPNYGETFDPKRKAMEYNVEEAKRLVKESGYDGT-PITYHTMGNYYANAMPALMMMIEMWKQIGVNVVMKTYAPGSFPPDNQTWMRNWS------NGQWMT---DAYATIVPEFGPNGQVQKRWGWKAPAEFNELCQKVTVLPNGKERFDAYNRMRDIFEEEA------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22990 for 3249 contacts (-7.1/contact) +
2D Compatibility (PS) -45485 + (NN) -19668 + (LL) 5548
1D Compatibility (HY) -27200 + (ID) 6450
Total energy: -116245.0 ( -35.78 by residue)
QMean score : 0.388
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