Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDAKSQQAEAQLQLLKKEQSAAKDFLQDLQRQQNEQEWLAEDVARVHQEERESLELLREVWQGAESRSFGYYLADLQEEEKQK-WHKKIQANEEECQQKITACRKNIYQLENQQQDLQKELLQ |
4AM8 Chain:A ((224-265)) | -------------------------------------------------------LYTDVW-------YGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCK------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 918 for 183 contacts (5.0/contact) +
2D Compatibility (PS) -4200 + (NN) 139 + (LL) 7568
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -375.0 ( -2.05 by residue)
QMean score : 0.281
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