Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIDSIMSKYNKQQVSKIKDFLLSEIDSDNIEETIDFVKSNNQEKMGKFQDILYDGGIYSGLFIEGNQYLISSSNRKVLIIDAVSEENGVDKELTRIECSLEDFTFLLRNIKDVLRYEEF
1JEQ Chain:A ((90-169))
--------TEKDKNSVNFKNIYVLQELDNPGAKRILELDQFKGQQGQKRFQDMMGHGSDYS------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17971 for 256 contacts (70.2/contact) +
2D Compatibility (PS) -5407 + (NN) 1925 + (LL) 5240
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 17529.0 ( 68.47 by residue)
QMean score : -0.018
(partial model without unconserved sides chains):
PDB file :
Tito_1JEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JEQ-query.scw
PDB file :
Tito_Scwrl_1JEQ.pdb
: