Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKIIAIDIDGTLLN-DTHEITPAVRDSIKAAKAKGVKVVLCTGRPLAGIKKSLIELDLLDEGDYAITFNGAVVLETASEKTLADITLNKTELEEIYAFCHAENVNVTYFDGKNMYVPSRKITEITCQDSLLLGTPLY---HLPV------EEAPESIHVSKVMLLDSPEKITDVIKKLPENIKEKFYVVRSVPYNLEFLQKGVNKGSALASLADKLGVDQSEVMSIGDQENDITMIEYAGMGVAMGNATEHIKEIANYTTTTNNEDGVAQAIQMLILDR |
| 2RAR Chain:A ((1-258)) | MTKALFFDIAGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKA-IINNLSELQDRNLIDGYITMNGAYCF--VGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISV---------CQPNEMVKKIFYDFLHVNVIPTVSFEEASNK-EVIQMTPFITEEEEKEVLPSIPTCEIGRWY-----PAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121061 for 2191 contacts (-55.3/contact) +
2D Compatibility (PS) -26759 + (NN) -6857 + (LL) 1852
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -172925.0 ( -78.93 by residue)
QMean score : 0.574
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