Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSTGMVRKIDELGRVVIPIEIRRTMNLNVKDPLEIFTDEDA-IILKKYSAGLVCDVTGEFSVDNKKFVDGKLTLSKEGAAALMEEIKRRFGDTL
2RO5 Chain:A ((1-51))
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSP--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RO5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12528 for 225 contacts (-55.7/contact) +
2D Compatibility (PS) -5086 + (NN) 624 + (LL) 2736
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -22354.0 ( -99.35 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_2RO5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RO5-query.scw
PDB file :
Tito_Scwrl_2RO5.pdb
: