Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LIMNANLEVNAELVKESYVYLLSRYLVLRQENFDTKEDKIPYNTLKHN--SVSPADANFVNPNFDVVYSEAWIAVDD-EHAVVLEVPEIKNRYYTVQLLDGWGEVVTNINERNFPEHPHGKFAFVKKGTNPS--IPSDAIKIELPSEKVKVLLRVEQKD-DPEGAVKLQKAFKFDAPDNIKIKEPLEIPHFTN--------AEFLLEEIYSNLEELLATYPDKMPKAAEFQDKARKVAAYIELGDDQKA-EVRNLIVKEALPYFTNGAKGFG---------TQKGGWSVTY--VAGA----FENDILARA------IINYGGIWA-NSIQEALYFIGQKGTDDELLTGDKIYKIHFSADELPAELANAFWSVTLYSVPDYHVIPNELNKFCINNYTGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAGKEFSLNFRLYVPKKEVLEGKVFLPPLEVF |
| 2P3Y Chain:A ((54-482)) | ----------FQRATQAYLWGIPASSIMEWLNVSRNDFKFEEGQMGFFNTLKQ--KQGIITANFTTPYVIGTWNLEKTG-PLIINLPEAKM---AGMMLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVD-RVVKQVVPNITTQPYADGKLGRKI---PVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDR-FVMAQLKFLGIEKGKPF-NPTEEQKKILLE-ASKVGRAMAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYD-ELDERAAWFYEAITVSRGMKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPAN--VPA--SNFWSTTVYDENNRLMIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVK-GYENNWVQTNPGEGWFTYFRFYGPTEKMFDKSWTMGDIELV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 94024 for 2897 contacts (32.5/contact) +
2D Compatibility (PS) -37605 + (NN) 11244 + (LL) 1940
1D Compatibility (HY) 20000 + (ID) 1150
Total energy: 88453.0 ( 30.53 by residue)
QMean score : 0.030
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