Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMSTLTYILDDLQQEGIILEGAETSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDLNAEIIENTSIPFSSEKKPEEAIELIAKNVKKMCGNRDMNHLLGVGIAISGLVNRKKGTVIRSTMLGWENVALEAMLHAHFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVGAGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGEELKEAYPTSE-----LNDFHFD-----KVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVIIVGEGLHHRDLFLTKIDEIASQNFFSGAGFETEITTTSLEDPAWLQGAALLVIHQLFQVPIYEEEQTLLR
3VGM Chain:A ((2-273))----------------------------------------------------------------------------------GLTIGVDIGGTKIAAGVVDEEGRILSTFKV-----ATPPTAEGIVDAICAAVAGASEGHDVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRV-GLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPI------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VGM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -139447 for 2164 contacts (-64.4/contact) +
2D Compatibility (PS) -28489 + (NN) -14220 + (LL) 9996
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -189460.0 ( -87.55 by residue)
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_3VGM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VGM-query.scw
PDB file : Tito_Scwrl_3VGM.pdb: