Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISITAPAKINLSLDALYKREDGYHEVEMVMTTIDLADRLYLERLDEDKIVLDVKAHFIPEDRRNLIYQAALLLKK------RFDVKMGVRITIDKHIPVSAGLAGGSSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPNIPGCWIVLAKPSISVSTPTIYKELQVDNVEHPDTQKMIESIKNGDLDGIFAATGNVLESVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLRGFCEEVYMVRPWSEGENDTNINY |
| 2WW4 Chain:A ((1-257)) | MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGV-EHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPV-DPPEKWYLVAHPGVSIPTPVIFKDPE---LPRNTPKRSIETLLKCEF-------SNDCEVIARKRFREVDAVLSWLLEYA--PSRLTGTGACVFAEFDTESEARQV---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132998 for 2076 contacts (-64.1/contact) +
2D Compatibility (PS) -26432 + (NN) -4869 + (LL) 1612
1D Compatibility (HY) -17600 + (ID) 4250
Total energy: -184537.0 ( -88.89 by residue)
QMean score : 0.460
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