Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVNH-----MRANLMNELKK---FDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTY-----------LPGFANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVAKRFCSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE |
| 1KHO Chain:A ((8-163)) | -------------------------------------------------------------TGTHAMIATQGVTILENDLSSNEPEVIRNNL--EILKQNMHDLQLGSTYPDYD-KNAY---DLYQDHFWDPDTDNNFTKDSKWYLSYSIPDTAESQIR--KFSALARYEWKRGNYKQATFYLGEAMHYFGDADTPYHAANVTAVDSPG--HVKFETFAEDRKDQYK--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14983 for 914 contacts (-16.4/contact) +
2D Compatibility (PS) -14614 + (NN) -6912 + (LL) 9176
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -36483.0 ( -39.92 by residue)
QMean score : 0.217
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