Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTNVKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMYTIIKEERTDESR
3DH3 Chain:B ((5-50))
--SSVRLNKYISESGICSRRE-ADRYIEQGNVFLNGKRATIGDQVKPGD-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -868 for 297 contacts (-2.9/contact) +
2D Compatibility (PS) -4948 + (NN) -1503 + (LL) 4652
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -6767.0 ( -22.78 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3DH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DH3-query.scw
PDB file :
Tito_Scwrl_3DH3.pdb
: