Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVFEPRLSSWLENAGDDDDVVLSSRIRLARNLKDEQF-PI-----YEQKEEIVDNIAEVFDDNF--ILIKMNQISLLQKALLVEKHLISP------YMMNKSEYG----AVLLNEEENVSIMLNEEDHLRIQCMTPGLRLFDALEAALQIDGYVEEKLSYAFDKEFGYLTSCVTNIGTGMRASVMVHLPGLVTTKRIKSVIEAIRS-LGFVVRGIYGEGSMPASNIFQVSNQVTLGKTEAEIVEDLTQVMEQIIMQERVARTTLKQKFHIALEDRVFRSYGLLMNCRIISMKEAADAISDIRFGVELGFFEHISRQKMNELVLFSQPAFLRREAGRDMDELEEKVIRAKVIREILGDK |
| 1P52 Chain:A ((120-356)) | ---------------------IISTRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKTVYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRK---VLEDIASKFNLQVRGTRGDHTESEGGVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAA-------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -128328 for 1659 contacts (-77.4/contact) +
2D Compatibility (PS) -24095 + (NN) -10238 + (LL) 9944
1D Compatibility (HY) -12400 + (ID) 3400
Total energy: -168517.0 ( -101.58 by residue)
QMean score : 0.465
|
|
|