Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADNRCSKVIVVCQEEERKHVKELMSQLNVAEH-RIEIVKGGSERQYSVAAGLERCGTGRVVLVHDGARPFITLDIIDRLLIGVEQSK-AAICAVKVKDTVKRVMNG--VVQETVDRENLWQVQTPQAFELPILRKAHQLARKEQFLGTDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPLAKAILGELGGIAND
1I52 Chain:A ((11-227))
-----VVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSR-----FAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYL---------
General information:
TITO was launched using:
RESULT:
Template:
1I52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147760 for 1711 contacts (-86.4/contact) +
2D Compatibility (PS) -22964 + (NN) -4342 + (LL) 1036
1D Compatibility (HY) -12400 + (ID) 4200
Total energy: -190630.0 ( -111.41 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_1I52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I52-query.scw
PDB file :
Tito_Scwrl_1I52.pdb
: