Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSDVDTFIFPSMGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGDETL--VRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG
1LYX Chain:A ((35-244))----------------------------------SKLDVVVFPVSVHYDHTRKLLQ-SKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDII--------


General information:
TITO was launched using:
RESULT:

Template: 1LYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101797 for 1610 contacts (-63.2/contact) +
2D Compatibility (PS) -22851 + (NN) -11375 + (LL) 2712
1D Compatibility (HY) -17200 + (ID) 3850
Total energy: -154361.0 ( -95.88 by residue)
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_1LYX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LYX-query.scw
PDB file : Tito_Scwrl_1LYX.pdb: