Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKLIIVMLTIFTAVLVVGCSGTGTADKAETKKETTKESKQANAVKKEVKEMKSNLDDVKKAISDKDKSALQSSAAELHKHWLEFENNVRDLYPLQYTDVEKYETPIFYESKNDNPNFDTLNDNATGLDGALDTLEKAKETKAKTSEVLDKAVDNYSKYVTEQVDEFVAQTEIFTNAVKSGDIEKAKAAYVSPRLNYERIEPIAESFGDLDPKIDARINDVENEADWTGFHVIERALWEKKSLEGMDVYADKLLTDAKALQAEVKNLKLEP-----KPMVA-GAMELLNEAATTKIT---GEEEAYSHTDLDDLNANVEGSKVVYQAIIPALNAQDKKLADQIDAAFNKMEDTLANYKNGDSFVLYTTLTKDQIRDISDQLSHLSELMAQTGKIF
3VUP Chain:A ((124-207))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLIKDQHKLQSYIDK-ALKPIVNHVKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQDILRFLNWQ------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -9172 for 403 contacts (-22.8/contact) +
2D Compatibility (PS) -7824 + (NN) 152 + (LL) 21484
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -3560.0 ( -8.83 by residue)
QMean score : 0.341

(partial model without unconserved sides chains):
PDB file : Tito_3VUP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VUP-query.scw
PDB file : Tito_Scwrl_3VUP.pdb: