Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKELLTFPKDFWWGSAWSAEQAEGR-GDTGKAKTVWEHWFETEPNRFYEGVGSEITTDHFNRYKEDVQWMKKTGQNSFRISISWARMFPDDGVGEVNQKAIAFYRDLLTEMNENGVKPFANLYHFDMPVALQDAGGWESREVVDAYVHFADTCFKEFGDLVYHWFTFNEPLGPILGGYLEGFHYPNQIDFKRGTQAGFNTILAHTLAIKAFKKINLSSKIGVILNLSPTYPRSQNEYDLEAAEICDAFYTRSFLDPMVKGTFPEKLVEIMREYDQMPEYTEE--DLTIIKENTAQILGLNYYEPRRVKARL--TAINEKSPFLPDWFFEPHNMPGKRMNIYRGWEIYERGIYDLCIDIRDNYGNIESFISENGMGVANEERFLNEEGQIQDDYRIQFVKDHLAYVHQAIAEGCDIKGYHLWTFIDCWSWINAYKNRYGLVSLDVETG-KRTMKKSGEFYKKMSDMNGFEYETSKLVGTKREETTNG |
| 4PTV Chain:A ((5-443)) | ----IIFPEDFIWGAATSSYQIEGAFNEDGKGESIWDR-FSHTPGKIENGDTGDIACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPE-GKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQALQDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHAPGTKDFKTALQVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQ--NLGAFTTQPGDMDIISRDI-DFLGINYYSRMVVRHKPGDNLFNAEVVKMED-------RPSTEM----GWEIYPQGLYDILVRVNKEYTDKPLYITENGAAFDDK---LTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLKDSALWYREV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172071 for 3831 contacts (-44.9/contact) +
2D Compatibility (PS) -45591 + (NN) -14349 + (LL) 2636
1D Compatibility (HY) -36800 + (ID) 7850
Total energy: -274025.0 ( -71.53 by residue)
QMean score : 0.524
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