Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRIGFIGAGNMGTAMIRGLAQANLVKREEIIVGGRNLEKLKPLEAEFTGLQITTDTEKLVEQADIIILAVKPYTIPEILTSVKEKLTPDKI-IISVAAGVTIQDLEELTSAKTKIVRVMPNTPALVGEAMSSVSPNTNVTSEELKEVTAIFTSFGEA-EVVSENLMDAVIGVSGSSPAYVYMFIEALADGAVLSGMPRDKAYKFAAQAVLGAAKTVLETGEHPGKLKDMVTSPGGTTIEAVKSLENDGFRSAVINAVQAAAKKNSSM |
3TRI Chain:A ((6-264)) | ---ITFIGGGNMARNIVVGLI-ANGYDPNRICVTNRSLDKLDFFK-EKCGVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTTEQAIKVLESGNLRELFIKALTAAVNR---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148863 for 1931 contacts (-77.1/contact) +
2D Compatibility (PS) -27941 + (NN) -7139 + (LL) 564
1D Compatibility (HY) -18400 + (ID) 4750
Total energy: -206529.0 ( -106.95 by residue)
QMean score : 0.476
|
|
|