Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNRQTEFTLLIVGASLSILTFLGAMLYTIIFGLNTLMVADTFGYYSSSEETILLGIITFFSVVAAFFA-----LGSAVFGFIGAFKVKSDGPKVKTLGVCFIVLGGLQVFTIHGILFLIAGILTITKKEYKTNSKEDEGTKWE------------------------------------- |
| 4QIQ Chain:A ((7-470)) | SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGP------VCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42965 for 802 contacts (-53.6/contact) +
2D Compatibility (PS) -13445 + (NN) -2474 + (LL) 376
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -65408.0 ( -81.56 by residue)
QMean score : 0.199
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