Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTFEDGARLEIMSRTDV--TGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEP--RMTGDGYYESV-VLDPEGNRIEITW
3HUH Chain:A ((23-141))
-RIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNRKA------LIF--GAQKINLHQQEMEFEPKASRPTPGSADLCFITST--PINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEIS-
General information:
TITO was launched using:
RESULT:
Template:
3HUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22516 for 745 contacts (-30.2/contact) +
2D Compatibility (PS) -12451 + (NN) -6146 + (LL) 768
1D Compatibility (HY) -5600 + (ID) 1550
Total energy: -47495.0 ( -63.75 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_3HUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HUH-query.scw
PDB file :
Tito_Scwrl_3HUH.pdb
: