Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGITLGNWDKHVLKMLESIKENADFYKNTVSADASILSFCFSKLTNSLFMDLFEKIDTNATVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
3BCG Chain:A ((12-64))
------TRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEIWE-------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BCG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42552 for 338 contacts (-125.9/contact) +
2D Compatibility (PS) -5505 + (NN) -642 + (LL) 9880
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -43169.0 ( -127.72 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_3BCG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BCG-query.scw
PDB file :
Tito_Scwrl_3BCG.pdb
: