Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALKLYGKRDLRYEEADMPTIEEPDDVILKVKTVGICGSDISRYS----KLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHPGAYAEYIKLPAENVVKIPNELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPLEVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYE--RNEFFGKVLFFPE |
| 2DFV Chain:A ((20-344)) | ---------------EVDVPK-PGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTID--FNNLIIFKALTIYG----ITGRHLWETWYTVSRLLQSGKLNLDPIITHKY---KGFDKYEEAFELMRAGKTGKVVF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212746 for 2757 contacts (-77.2/contact) +
2D Compatibility (PS) -34265 + (NN) -11808 + (LL) 2448
1D Compatibility (HY) -21600 + (ID) 5600
Total energy: -283571.0 ( -102.85 by residue)
QMean score : 0.504
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