Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHLYSEMERLKFRTSAVAILVVNENHIVHECQILTGKTVFAQFKTFTNYHHKELSEILTELSSKNKNTIQEKAIIKTVNSCMKAL
1U07 Chain:A ((176-197))
--------------------------------------------------------VKVKFDVTPDGRVDNVQILSAK------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1U07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9047 for 89 contacts (-101.7/contact) +
2D Compatibility (PS) -2343 + (NN) -227 + (LL) 9364
1D Compatibility (HY) -800 + (ID) 300
Total energy: -3353.0 ( -37.67 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_1U07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U07-query.scw
PDB file :
Tito_Scwrl_1U07.pdb
: