Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKEMLNFDYYNPTHIIFGKNRFNELNEVIPQDKKVLILYGGGSVERFGTLDKVKAALKSREVGEFGGIEANPTYETLIKAIQLVKEENYDFLLAVGGGSVIDGTKFVAAGALFDGEPMDIFGSGIGEKRPITK-ALPFGTVLTLPATGSEMNSGGVITFVEKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTYPVGALLQDRYAESLLQTLIEIGPDVIK---EDNHDYNTRATFMWSATNALNGTLSRGVPQDWASHSLGHEITALYGIDHARTLAIVLPSLLNVRRSEKHDKLVQYAERVWGIT--SGSDEEKIDAAILKTREFFESLGAGTRFSDYGLGEEVVDLLVDQLDRHGLTNISERGDQTLEVSRQIYTNAL |
| 2BI4 Chain:A ((62-391)) | ---------------------------------------------------DKMDAAGLAWAI--YDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIG---IISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWAL-----TDALHIKAIEIIAGALRGSVAGDKDAGEEMALGQYVAGMGFSNVGLGL-----VHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIA-RVMGVKVEGMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDVCTGGNPR-EATLEDIVELYHTA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BI4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147592 for 2972 contacts (-49.7/contact) +
2D Compatibility (PS) -34339 + (NN) -10724 + (LL) 3804
1D Compatibility (HY) -11600 + (ID) 3950
Total energy: -204401.0 ( -68.78 by residue)
QMean score : 0.457
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