Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRDGHTHTEFCPHGTHDDVEEMILKAIELDFDEYSIVEHAPLSREFMNNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYEDFTRDFLDEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLTYLEGVKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVKKRDYELDFNTAGLFKSLCGETYPPKEIVTLARELKIPLVYGSDSHGVQDIGRGYNTYCQK |
| 2YXO Chain:A ((1-239)) | -MVDSHVHTPLCGHAE-GHPEAYLEEARAKGLKGVVFTDHSPMPPWYDP----------ESRMRLEALPFYLLALERVRERA-QDLYVGIGLEADFHPGTEGFLAQLLR--RYPFDYVIGSVHYLGA----WPLDHPDHQ-EE---YAWRDLKEVFRAYFQEVEKAAR----SGLFHAIGHLDLPKKFGHRLP------EEALLELAEPALRAVAEAGLFLDVNTAGLRRP-AKEVYPAPALLRRARELGIGLVLGSDAHRPEEVGFAFPEVQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84266 for 2057 contacts (-41.0/contact) +
2D Compatibility (PS) -25980 + (NN) -13133 + (LL) 1816
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -137513.0 ( -66.85 by residue)
QMean score : 0.438
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