Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPIEQLLANNNTTATDIESNTRLKEGSLQKIIDKDIRTSDISLRVLSQIAIFLNTGADIIAKQLSDIEVANDLAFLIED
1Y9Q Chain:A ((16-70))
---LKNLRKSRGLSLDATAQLTGVSKAMLGQIERGE---SSPTIATLWKIASGLEASFSAF-------------------
General information:
TITO was launched using:
RESULT:
Template:
1Y9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33442 for 358 contacts (-93.4/contact) +
2D Compatibility (PS) -5923 + (NN) -2196 + (LL) 2216
1D Compatibility (HY) -800 + (ID) 450
Total energy: -40595.0 ( -113.39 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_1Y9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y9Q-query.scw
PDB file :
Tito_Scwrl_1Y9Q.pdb
: