Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLGIISTISVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
2BG9 Chain:E ((226-344))
-------------------------------------------IAPCVLISSLVVLVYFLPAQ-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2BG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7342 for 82 contacts (-89.5/contact) +
2D Compatibility (PS) -1779 + (NN) 2261 + (LL) 6836
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -2624.0 ( -32.00 by residue)
QMean score : -0.038
(partial model without unconserved sides chains):
PDB file :
Tito_2BG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BG9-query.scw
PDB file :
Tito_Scwrl_2BG9.pdb
: