Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LILFYFLLIIGKFTFAYFQIFKDPNFLALGMDLLFIVLLLGLIHLFAPVRSHIYWYAGMSLFIGILMLVCVLYARFYNEVPTYHSFSLIGEVGVVKNSATSLLSGTDWLYILDIILLPFILYFNIKKGHEFPSFRLTSRVYGVSFISTLLILSGFTYFMMQQNIISDSKRAKRMGIFTFNISTALTGADHVKAADITAKNVNDIKGVSVKSNPDYFGAAKGKNLIIVQLESFQRNLTNVKINGQSITPTLDGLQNETMYSNQFFQTVSKSNTADAEWSVYTSTFPSG------YYTNTQTYGDRVIPSMPRLLGKNDYKTATFHTNDASFYNRDEFYPAVGFDKFYDRKFFGDEDVIG-FSPSDEVLYNKAFPILEEQYKNNQKFYAQLISVSSHMPFDIPKDKQEIDLPSDLKDTELGNYFEAVHYADKQLGEFIQKLKDSGIWDDSVVVFYGDHHIIKTDQLPEEQKKYVNRSTQLKAEPADDYRIPFFLHYPGMENPGEIKNVGGEIDIMPTVMNLLGIKTGDQIMFGTDILNSSNNYVPERYTMPEGSYFTNSYMYQPDESFETGAATNYDGTNKELSSDVKKRFDASRKLLQYSDSYVNNLPLRNEDK |
| 3LXQ Chain:A ((76-356)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNPATY-QGKRKNLVILLQESLGAQFVG-SLGGLPLTPNLDELMQEGWQFTQMYATGTRSVRG---IEAVTTGFPPSPSRAVVKLSKSQT----GFFTIADLLKEQGYHTQFIYGGEANFDNMKTFFFGNGFDQIVEEKNYTNPGFVGSWGVSDEDLYNKADEEFERLSKGDKPFFSLVFTSSNHSPYEYPEGKIE------QYDSEHMTRNNAVKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDA---------------RVFGANLVPVKHFHIPALIIGKDIQ-PRKDDRIANNIDMPPTLLSLIGV------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94617 for 2383 contacts (-39.7/contact) +
2D Compatibility (PS) -29130 + (NN) -9479 + (LL) 22392
1D Compatibility (HY) -16400 + (ID) 4150
Total energy: -131384.0 ( -55.13 by residue)
QMean score : 0.369
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