Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTYALEIKGLRKIYSTGVEALRGVDLTVEEGDFYALLGPNGAGKSTTIGIITSLVNKTSGQVSVFGYDLD---TDIVRAKQQIGLVPQEFNFNPFET-VQQIVVNQAGYYGVSRKEAIKRSEKYLKQSNLWEKRSERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRREMWTFLRELNESGTTIILTTHYLEEAEMLCRNIGIIQSGELIENTSMKSLLSKLQFETFIFDLEPYEEAFEITGYNHVFEDKQTLSVEVERNQGVNHIFEQLSEHGIKVLSMRNKSNRLEELFLKITEEKHQVGEKHV
4YMU Chain:J ((14-216))-----------------LEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINNGKVNINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVVVTHEMGFAREVGDRVIFMDDGVIVE-----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -98680 for 1561 contacts (-63.2/contact) +
2D Compatibility (PS) -21750 + (NN) -7985 + (LL) 8948
1D Compatibility (HY) -16800 + (ID) 3200
Total energy: -139467.0 ( -89.34 by residue)
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4YMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMU-query.scw
PDB file : Tito_Scwrl_4YMU.pdb: