Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIEIYTVNGESIRLDDDAKINNISIHELSKADLKNLFNEKCIELTKYDLTYFINTNQVNWFLVSEGIH
3KZD Chain:A ((897-912))
-------------------EINNRAADALNSSMLK----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -868 for 60 contacts (-14.5/contact) +
2D Compatibility (PS) -1551 + (NN) 639 + (LL) 3944
1D Compatibility (HY) -400 + (ID) 300
Total energy: 1464.0 ( 24.40 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_3KZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZD-query.scw
PDB file :
Tito_Scwrl_3KZD.pdb
: