Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSGSAE-LSAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
3S03 Chain:A ((22-140)) | ----------------------------------------------------------------------------------------------------------------------------------------------DQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYG--VNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4561 for 871 contacts (-5.2/contact) +
2D Compatibility (PS) -12814 + (NN) -8257 + (LL) 11848
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -24384.0 ( -28.00 by residue)
QMean score : 0.438
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