Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VRKLGLMTILFWMFLSVQAFAADLEPPMISLEKEQRVFTSGEVISFHVKNPEELKIVLVNEHGQRKLLDGETYTVTDWDLDGNYQAEFYQADISKPVVTVEDLFEVKQLEEVAKDETAPSLKMIEITHDEDVLPTSVLYASAELDDAESGVKQAILLVHSKSNESEMELIRNNYTGEFDAEIPLEKFQLGEELTFQLQLVDFAENEITLDLENTIQLYEPKAPVLSYDGSDITNVQKKIGQVGNRIELTLDKYTTEFPELETENGKTIPLLWQKTATEWKGSLALTTELSGEIIHIQEMNQYMLVRATSEPFGDIQLINNSILTGTIHPDFTFISNLYVEVNGQNFPIKRTDNSFTSAEITTTGKITLHWTDWDGQVFS-KQMNQEIKPVIEMPDKETIAPPSVIPKEKESLLTSPDPKPSVESHENTPKKQEKKETSTKNKSSSIPFWIPALMIIGVIIFSGNRAMK |
3FR2 Chain:A ((50-116)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVE---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 915 for 354 contacts (2.6/contact) +
2D Compatibility (PS) -7290 + (NN) -3088 + (LL) 28612
1D Compatibility (HY) -800 + (ID) 950
Total energy: 17399.0 ( 49.15 by residue)
QMean score : 0.283
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