Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFPKKLVASIAVFISLGFIYFRVSTAVAFENTSSASLLPSTGDAFSVWPIVIGVVLVALAVVLFIKKKI
1P2M Chain:A ((106-133))
---------------------LKLSTAASFSQTVSAVCLPSASDDFA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1P2M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -850 for 69 contacts (-12.3/contact) +
2D Compatibility (PS) -2544 + (NN) 353 + (LL) 5428
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -213.0 ( -3.09 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_1P2M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P2M-query.scw
PDB file :
Tito_Scwrl_1P2M.pdb
: