Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVGNNIAKSYPNKLVLQNVDFEAKSGDMIVLTGENGSGKTTLLDMLASLKKPDSGTLELDNE----LFTTNDIRQQIAYLNNELYAKKSTTIED-----FMKQHGLLFENIELDKWDRLLAGWRINK-RLKLGE-LSTGMLMKVKIGSVLARKAKLYLYDEPFASIDIMARSEVMKAIISETNPDAITIISSHHLEGTEKLYSKLWLIKDNTLQTIETETYREETGNALIDFYKEEMNK
4P32 Chain:A ((3-221))
-LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-DRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPT-------------------
General information:
TITO was launched using:
RESULT:
Template:
4P32.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92128 for 1632 contacts (-56.5/contact) +
2D Compatibility (PS) -21998 + (NN) -4427 + (LL) 1720
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -130133.0 ( -79.74 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_4P32.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P32-query.scw
PDB file :
Tito_Scwrl_4P32.pdb
: