Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MFKNLFKKPKMKDEMLEMKQ-------NQYGARAFNMMIIIVAIVILIKAVVL----------EASISELWVELLLLIVGGGYYFYSVLKN-----NVPFMPTISLKQTIRLV-------FLISAIFGISVGIRNVFFLYA-DNMSGTELSYQMMM-F-FFISLFTAIGSGVIFGALAYCLYQ-LSKWQEKNIMKKIEVENAED |
| 3RMR Chain:A ((63-311)) | WPFGPSAVEALIETIDRHGRVSLNDEAKMKKVVRTWKKLIERDDLIGEIGKHYFEAPGPLHDTYDEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGYTSDNVVSSIATGHDVDFFAPTAFTFLVKCVESEDDANNAIFEYFGSNPSRYFSAVLHAMEKPDADSRVLESSKKWMFQCYAQKQFPTPVFERTLAAYQYEKLSLSQIEELVEEYSRIYS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RMR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84056 for 1051 contacts (-80.0/contact) +
2D Compatibility (PS) -17193 + (NN) -6117 + (LL) 24
1D Compatibility (HY) 11200 + (ID) 700
Total energy: -96842.0 ( -92.14 by residue)
QMean score : 0.154
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