Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVGIIIGTHGEAARELLKSTEMIIGKQDNVEFITFVPGENTDTLITKYKEKLDKLDTSEGVIFMVDLFGGSPYNASSQIALPEDNMDVVTGVNIPMLLETLSMRAASNQKDLVETALTAGSGGVKSLKQSLPKIETEVGEDDL
3MTQ Chain:A ((6-134))
-----IFASHGSFANGLLNSVELILGKQPDIHTLCAYVEEEVD-LTQQVEALVARFPAQDELIVITDIFAGSVNNEFVRF-LSRPHFHLLSGLNLPLIIDLLISAAEDNTEKLITEALTNAKESIQYCNQTIASAM--------
General information:
TITO was launched using:
RESULT:
Template:
3MTQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49055 for 870 contacts (-56.4/contact) +
2D Compatibility (PS) -14342 + (NN) -7865 + (LL) 720
1D Compatibility (HY) -12000 + (ID) 1650
Total energy: -84192.0 ( -96.77 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_3MTQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MTQ-query.scw
PDB file :
Tito_Scwrl_3MTQ.pdb
: