Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVLFIKASPLPNEVSRSSQVAETFMAEYKAKNPSDTVEELVLYNTEVPLLDLELMTAGRELQAGKAFTDLAPDVQKKLNAYNALTEQFLAADKYVFVFPLWNLGIPPLLKAYIDTFVIAGKSFRYTEHGPEALLKDKKAILIHGSGGIYSAGPTSSFTHGEPYLRTILQFIGINVVPSIFVEGIDHNPSKEAEIVAAAKAVAQESATEF
2Z98 Chain:A ((1-192))
-SKVLVLKSSILAG-YSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGAL-----------LTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVT---PYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKA---------
General information:
TITO was launched using:
RESULT:
Template:
2Z98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118707 for 1424 contacts (-83.4/contact) +
2D Compatibility (PS) -20521 + (NN) -5871 + (LL) 2040
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -160909.0 ( -113.00 by residue)
QMean score : 0.660
(partial model without unconserved sides chains):
PDB file :
Tito_2Z98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z98-query.scw
PDB file :
Tito_Scwrl_2Z98.pdb
: