Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL--SFDDDNKYSMPYFWGTLGIIYN----KEMFPDKN-FDTWNALFDPE-----LKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAEMLSENED------LEYVIPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPENAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELNNLEVYDNLGKRMLSYYNELFLEFKMYRK
3TTM Chain:A ((9-328))-----------------------------------VLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDL--------------------


General information:
TITO was launched using:
RESULT:

Template: 3TTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115337 for 2543 contacts (-45.4/contact) +
2D Compatibility (PS) -33380 + (NN) -20950 + (LL) 5380
1D Compatibility (HY) -20800 + (ID) 5450
Total energy: -190537.0 ( -74.93 by residue)
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_3TTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TTM-query.scw
PDB file : Tito_Scwrl_3TTM.pdb: