Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTGWHRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNHISLTVFREDWLE----NLT--LEATLRIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGFHVLVGGELAPIIGRVCMDQTIIKLPREFQTGSKVTIIGKDHGNTITADDAAQYLDTINYEVTCLLNERIPRKYIH |
4A3Q Chain:A ((2-368)) | -SDKYYRSAYMNVDLNAVASNFKVFSTLHPNKT-VMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAK-ILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHF--------DMTTEQYQRFKDMVNEAI-KPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKT------------------TTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIY-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -232497 for 2842 contacts (-81.8/contact) +
2D Compatibility (PS) -36331 + (NN) -6746 + (LL) 1876
1D Compatibility (HY) -28800 + (ID) 6700
Total energy: -309198.0 ( -108.80 by residue)
QMean score : 0.557
|
|
|