Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLGIIWGIIVVLLAVWLLGIIFHIAGGLINILLVIVLILVIWNLIQMARNKRK-
1S5R Chain:A ((1-23))
-------------------------------DFTPMDSSAVYVLSSMARQRRAS
General information:
TITO was launched using:
RESULT:
Template:
1S5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6486 for 80 contacts (-81.1/contact) +
2D Compatibility (PS) -2131 + (NN) 1366 + (LL) 3512
1D Compatibility (HY) 800 + (ID) 250
Total energy: -3189.0 ( -39.86 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_1S5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S5R-query.scw
PDB file :
Tito_Scwrl_1S5R.pdb
: