Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEARSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPYNK |
2KS1 Chain:B ((165-173)) | ---------------------------------------------------------------------------------GLFMRRRHI-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1344 for 27 contacts (49.8/contact) +
2D Compatibility (PS) -905 + (NN) 251 + (LL) 9780
1D Compatibility (HY) -400 + (ID) 50
Total energy: 10020.0 ( 371.11 by residue)
QMean score : 0.314
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