Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTSIIERIDAWAEKTPDFPCYEYAGTRLSYKELKRQSDAFGSFLLKNLITDKEKPIIVYGHMSPLMLVAFLGSIKSGRAYVPVDVSMPVERIEQIKKAADPSMFICTEELPNN---LTITGCPVLTQDQLMDALEKHFGEVPDKEACVNNDDNYYIIYTSGSTGNPKGVQISQNNLVSFSNWILQDF-SLSQGLRFLNQAPFSFDLSVMDLYPSLLSGGTLVPLDKTITANMKDLYREIPAQNLDVWVSTPSFADLCLLDENFNQENNPRLTRFLFCGEVLAKKTASELLDRFPDAVIYNTYGPTEATVAVTQVKVTREIIDAYPSLPLGVIKPDMRLHIVDQETGEVLPEGEKGEIVLIGASVSKGYLNEPEKTDQVFFD--YK-GYQAYRTGD-SGIIKDGYLFFQGRLDFQIKLHGYRIELEDIENNLKKVSYIQNCAIIPKMKDEKVDMLVAQVIPTTHDFEKEYQLSAA-IKKELKEFMPAYMIPRKWIYKTDFPLTMNGKIDRKSLNSEVNK |
| 2VSQ Chain:A ((478-971)) | ----------------PDAPALTYSGQTLSYRELDEEANRIARRLQKH-GAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELPYTGTTLFIDDQT-----RFEEQASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGLVKHV--DYMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNL-LTDAGEDWMKGLRC--ILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFAT-AHVVHDLPDSISSLPIGKPISNASVYILNEQS-QLQPFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHESGDASINAYLVNRT-------QLSAEDVKAHLKKQLPAYMVPQTFTFLDELPLTTNGKVNKRLL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221173 for 3847 contacts (-57.5/contact) +
2D Compatibility (PS) -50512 + (NN) -23002 + (LL) 3508
1D Compatibility (HY) -24800 + (ID) 7300
Total energy: -323279.0 ( -84.03 by residue)
QMean score : 0.423
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